Fics like Understanding the Prototype

ONI and UNSC HighCom had thought it was some sort of Flood mutation. Or something Flood-like. But they had assumed wrong. It hadn't resisted capture as much as was predicted. It was still a humanoid. It spoke and thought freely. It was more of a he, and he preferred to be called Alex Mercer. This is what caught Doctor Halsey's attention. He was alive, he wasn't human, she wanted to understand someone like that while ONI wanted to use him as a weapon. So a deal was struck. Under the vigilant guard of the Master Chief, Halsey would get to interview Alex Mercer, to really understand just how someone like him operates on a psychological level. And, in exchange, ONI would get to keep an eye on something they considered dangerous, and use the information gathered as they saw fit.

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